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- I Habibi, R Cheong, T Lipniacki, A Levchenko, ES Emamian, A Abdi. "Computation and measurement of cell decision making errors using single cell data." PLoS Computational Biology. 13(4):e1005436 (2017).
- A Rhee*, R Cheong*, A Levchenko. "Noise decomposition of intracellular biochemical signaling networks using nonequivalent reporters." Proceedings of the National Academy of Sciences (USA). 111(48):17330-5 (2014).
- M Brennan, R Cheong, A Levchenko. "How information theory handles cell signaling and uncertainty." Science. 338(6105):334-5 (2012).
- A Rhee, R Cheong*, A Levchenko*. "The application of information theory to biochemical signaling systems." Physical Biology. 9(4):045011 (2012).
- R Cheong, A Rhee, CJ Wang, I Nemenman, A Levchenko. "Information transduction capacity of noisy biochemical signaling networks." Science. 334(6054):354-8 (2011). (Featured in Science's Perspectives and Biopolymers' Research highlights.)
- EM Hur, IH Yang, DH Kim, J Byun, Saijilafu, WL Xu, PR Nicovich, R Cheong, A Levchenko, N Thakor, FQ Zhou. "Engineering neuronal growth cones to promote axon regeneration over inhibitory molecules." Proceedings of the National Academy of Sciences (USA). 108(12):5057-62 (2011).
- MJ Stine, CJ Wang, WF Moriarty, B Ryu, R Cheong, WH Westra, A Levchenko, RM Alani. "Integration of genotypic and phenotypic screening reveals molecular mediators of melanoma-stromal interaction." Cancer Research. 71(7):2433-44 (2011).
- R Cheong, A Levchenko. "Oscillatory signaling processes: the how, the why and the where." Current Opinion in Genetics and Development. 20(6):665-9 (2010).
- B Compani, T Su, I Chang, J Cheng, KH Shah, T Whisenant, Y Dou, A Bergmann, R Cheong, B Wold, L Bardwell, A Levchenko, P Baldi, E Mjolsness. "A scalable and integrative system for pathway bioinformatics and systems biology." Advances in Experimental Medicine and Biology. 680:525-34 (2010).
- Z Yin, SC Tao, R Cheong, H Zhu, A Levchenko. "An integrated micro-electro-fluidic and protein arraying system for parallel analysis of cell responses to controlled microenvironments." Integrative Biology. 2(9):416-23 (2010).
- R Cheong, S Paliwal, A Levchenko. "High content screening in microfluidic devices." Expert Opinion on Drug Discovery. 5(8): 715-20 (2010).
- D Fan, Z Yin, FQ Zhu, R Cheong, R Cammarata, CL Chien, A Levchenko. "Subcellular-resolution delivery of a cytokine through precisely manipulated nanowires." Nature Nanotechnology. 5(7):545-51 (2010). (Featured in News and Views.)
- M Fosbrink, NN Aye-Han, R Cheong, A Levchenko, J Zhang. "Visualization of JNK activity dynamics with a genetically encoded fluorescent biosensor." Proceedings of the National Academy of Sciences (USA). 107(12):5459-5464 (2010).
- DH Kim, EA Lipke, P Kim, R Cheong, S Thompson, M Delannoy, KY Suh, L Tung, A Levchenko. "Nanoscale cues regulate the structure and function of macroscopic cardiac tissue constructs." Proceedings of the National Academy of Sciences (USA). 107(2):565-570 (2010).
- R Cheong*, Paliwal S*, A Levchenko. "Models at the single cell level." Wiley Interdisciplinary Reviews: Systems Biology and Medicine. 2(1):34-48 (2010).
- R Cheong, CJ Wang, A Levchenko. "Using a microfluidic device for high-content analysis of cell signaling." Science Signaling. 2(75):pl2 (2009). (Featured on cover.)
- R Cheong*, CJ Wang*, A Levchenko. "High-content cell screening in a microfluidic device." Molecular and Cellular Proteomics. 8(3):433-42 (2009). (Featured in Science Signaling.)
- R Cheong, A Hoffmann, A Levchenko. "Understanding NF-kappaB signaling via mathematical modeling." Molecular Systems Biology. 4:192 (2008).
- R Cheong, A Levchenko. "Wires in the soup: quantitative models of cell signaling." Trends in Cell Biology. 18(3):112-8 (2008).
- A Kaneda, CJ Wang, R Cheong, W Timp, P Onyango, B Wen, CA Iacobuzio-Donahue, R Ohlsson, R Andraos, MA Pearson, AA Sharov, DL Longo, MS Ko, A Levchenko, AP Feinberg. "Enhanced sensitivity to IGF-II signaling links loss of imprinting of IGF2 to increased cell proliferation and tumor risk." Proceedings of the National Academy of Sciences (USA). 104(52):20926-31 (2007).
- R Cheong, RK Wilson, I Cortese, DE Newman-Toker. "Mothball withdrawal encephalopathy: case report and review of paradichlorobenzene neurotoxicity." Substance Abuse. 27(4):63-7 (2006).
- R Cheong, A Bergmann, S Werner, A Hoffmann, A Levchenko. "Transient IkappaB kinase activity mediates temporal NF-kappaB dynamics in response to a wide range of tumor necrosis factor-alpha doses." Journal of Biological Chemistry. 281(5):2945-50 (2006).
- JD Kahn, R Cheong, RA Mehta, LM Edelman, MA Morgan. "Flexibility and control of protein-DNA loops." Biophysical Reviews and Letters. 1(4):327-41 (2006).
- D Barken, CJ Wang, J Kearns, R Cheong, A Hoffmann, A Levchenko. "Comment on 'Oscillations in NF-kappaB signaling control the dynamics of gene expression'." Science. 308(5718):52 (2005).
- R Cheong, A Levchenko. "Survey of the NF-kappaB Transcription Factor: Function, Structure, Regulation, Pathways, and Applications." Encyclopedia of Molecular Cell Biology and Molecular Medicine, 2nd edition. Wiley-VCH: New York, 2005. (Book chapter)
- LM Edelman, R Cheong, JD Kahn. "Fluorescence resonance energy transfer over approximately 130 basepairs in hyperstable lac repressor-DNA loops." Biophysical Journal. 84(2 Pt 1):1131-1145 (2003).
* Co-first author or co-corresponding author